Pathogen List

Highlights

Bacteria

Nocardia species (70)
Legionella species (20)
Rickettsia species (18)
Actinomyces species (14)
Mycoplasma species (7)
HACEK organisms (including Haemophilus parainfluenzae,
Aggregatibacter aphrophilus,
Aggregatibacter actinomycetemcomitans,
Cardiobacterium hominis,
Eikenella corrodens and
Kingella kingae)
Streptobacillus moniliformis
Mycobacterium tuberculosis complex
Mycobacterium avium complex (MAC)
Mycobacterium chimaera
Other nontuberculous mycobacteria species (42)

Fungi/Molds

Candida species (24) - including Candida auris
Penicillium species (22)
Aspergillus species (22)
Fusarium species (13)
Mucor species (5)
Rhizopus species (4)
Rhizomucor species (2)
Scedosporium species (2)
Blastomyces dermatitidis
Coccidioides immitis
Histoplasma capsulatum
Cryptococcus neoformans
Cryptococcus gattii
Pneumocystis jirovecii

Other Eukaryota

Plasmodium species (5)
Toxoplasma gondii
Acanthamoeba castellanii
Balamuthia mandrillaris
Naegleria fowleri

Viruses

Cytomegalovirus (CMV)
Epstein-Barr virus (EBV)
Human adenovirus A
BK polyomavirus
JC polyomavirus
Torque teno virus

All

Abiotrophia defectiva
Absidia glauca
Acanthamoeba castellanii
Achromobacter denitrificans
Achromobacter xylosoxidans
Acidaminococcus intestini
Acidovorax citrulli
Acinetobacter baumannii
Acinetobacter bereziniae
Acinetobacter calcoaceticus
Acinetobacter haemolyticus
Acinetobacter pittii
Acinetobacter radioresistens
Acinetobacter ursingii
Acremonium chrysogenum
Acremonium furcatum
Actinobacillus ureae
Actinomadura latina
Actinomadura madurae
Actinomucor elegans
Actinomyces cardiffensis
Actinomyces europaeus
Actinomyces georgiae
Actinomyces gerencseriae
Actinomyces graevenitzii
Actinomyces israelii
Actinomyces massiliensis
Actinomyces meyeri
Actinomyces neuii
Actinomyces odontolyticus
Actinomyces oris
Actinomyces timonensis
Actinomyces turicensis
Actinomyces viscosus
Adeno-associated dependoparvovirus A
Adeno-associated dependoparvovirus B
Aerococcus sanguinicola
Aerococcus urinae
Aerococcus viridans
Aeromonas caviae
Aeromonas hydrophila
Aeromonas schubertii
Aeromonas veronii
Aggregatibacter actinomycetemcomitans
Aggregatibacter aphrophilus
Aggregatibacter segnis
Agrobacterium tumefaciens
Alcaligenes faecalis
Alloiococcus otitis
Alloscardovia omnicolens
Alphapapillomavirus 1
Alphapapillomavirus 10
Alphapapillomavirus 11
Alphapapillomavirus 14
Alphapapillomavirus 2
Alphapapillomavirus 3
Alphapapillomavirus 4
Alphapapillomavirus 5
Alphapapillomavirus 6
Alphapapillomavirus 7
Alphapapillomavirus 8
Alphapapillomavirus 9
Alternaria alternata
Alternaria arborescens
Alternaria brassicicola
Anaerobiospirillum succiniciproducens
Anaerococcus hydrogenalis
Anaerococcus lactolyticus
Anaerococcus prevotii
Anaerococcus tetradius
Anaeroglobus geminatus
Anaplasma phagocytophilum
Angiostrongylus cantonensis
Angiostrongylus costaricensis
Anisakis simplex
Anncaliia algerae
Apophysomyces elegans
Apophysomyces trapeziformis
Arcanobacterium bernardiae
Arcanobacterium haemolyticum
Arcanobacterium pyogenes
Arcobacter butzleri
Arcobacter cryaerophilus
Arcobacter skirrowi
Aspergillus awamori
Aspergillus calidoustus
Aspergillus clavatus
Aspergillus fischeri
Aspergillus flavus
Aspergillus fumigatus
Aspergillus kawachii
Aspergillus lentulus
Aspergillus luchuensis
Aspergillus nidulans
Aspergillus niger
Aspergillus nomius
Aspergillus ochraceoroseus
Aspergillus oryzae
Aspergillus parasiticus
Aspergillus rambellii
Aspergillus sclerotiorum
Aspergillus sojae
Aspergillus terreus
Aspergillus udagawae
Aspergillus ustus
Aspergillus westerdijkiae
Atopobium parvulum
Atopobium rimae
Atopobium vaginae
Aureobasidium melanogenum
Aureobasidium namibiae
Aureobasidium pullulans
Aureobasidium subglaciale
Babesia divergens
Babesia microti
Bacillus anthracis
Bacillus cereus
Bacillus circulans
Bacillus coagulans
Bacillus licheniformis
Bacillus megaterium
Bacillus pumilus
Bacillus sphaericus
Bacillus subtilis
Bacillus thuringiensis
Bacteroides caccae
Bacteroides distasonis
Bacteroides eggerthii
Bacteroides forsythus
Bacteroides fragilis
Bacteroides merdae
Bacteroides ovatus
Bacteroides stercoris
Bacteroides thetaiotaomicron
Bacteroides uniformis
Bacteroides vulgatus
Balamuthia mandrillaris
Bartonella alsatica
Bartonella bacilliformis
Bartonella birtlesii
Bartonella bovis
Bartonella clarridgeiae
Bartonella doshiae
Bartonella elizabethae
Bartonella grahamii
Bartonella henselae
Bartonella koehlerae
Bartonella quintana
Bartonella rattaustraliani
Bartonella rochalimae
Bartonella schoenbuchensis
Bartonella taylorii
Bartonella tribocorum
Bartonella vinsonii
Basidiobolus meristosporus
Beauveria bassiana
Beauveria rudraprayagi
Bergeyella zoohelcum
Betapapillomavirus 1
Betapapillomavirus 2
Betapapillomavirus 3
Betapapillomavirus 4
Betapapillomavirus 5
Bifidobacterium adolescentis
Bifidobacterium breve
Bifidobacterium dentium
Bifidobacterium longum
Bifidobacterium scardovii
Bipolaris papendorfii
BK polyomavirus
Blastocystis hominis
Blastomyces dermatitidis
Bordetella bronchiseptica
Bordetella hinzii
Bordetella holmesii
Bordetella parapertussis
Bordetella pertussis
Bordetella petrii
Borrelia burgdorferi
Borrelia crocidurae
Borrelia duttonii
Borrelia hermsii
Borrelia hispanica
Borrelia miyamotoi
Borrelia parkeri
Borrelia persica
Borrelia recurrentis
Borrelia turicatae
Borreliella afzelii
Borreliella garinii
Brevibacillus brevis
Brevibacillus laterosporus
Brevibacterium casei
Brevundimonas diminuta
Brevundimonas vesicularis
Brucella abortus
Brucella canis
Brucella melitensis
Brucella suis
Brugia malayi
Burkholderia ambifaria
Burkholderia anthina
Burkholderia cenocepacia
Burkholderia cepacia
Burkholderia gladioli
Burkholderia mallei
Burkholderia multivorans
Burkholderia pseudomallei
Burkholderia pyrrocinia
Burkholderia stabilis
Byssochlamys spectabilis
Campylobacter coli
Campylobacter concisus
Campylobacter corcagiensis
Campylobacter cuniculorum
Campylobacter curvus
Campylobacter fetus
Campylobacter gracilis
Campylobacter hominis
Campylobacter hyointestinalis
Campylobacter iguaniorum
Campylobacter jejuni
Campylobacter lari
Campylobacter mucosalis
Campylobacter showae
Campylobacter sp. MIT 97-5078
Campylobacter sputorum
Campylobacter upsaliensis
Campylobacter ureolyticus
Candida albicans
Candida auris
Candida boidinii
Candida bracarensis
Candida carpophila
Candida castellii
Candida dubliniensis
Candida ethanolica
Candida famata
Candida glabrata
Candida intermedia
Candida kefyr
Candida krusei
Candida lusitaniae
Candida nivariensis
Candida orthopsilosis
Candida parapsilosis
Candida sojae
Candida sorboxylosa
Candida succiphila
Candida tenuis
Candida tropicalis
Candida utilis
Candida versatilis
Capnocytophaga canimorsus
Capnocytophaga cynodegmi
Capnocytophaga gingivalis
Capnocytophaga granulosa
Capnocytophaga haemolytica
Capnocytophaga ochracea
Capnocytophaga sputigena
Cardiobacterium hominis
Cardiobacterium valvarum
Catabacter hongkongensis
Cedecea neteri
Ceratocystis adiposa
Ceratocystis albifundus
Ceratocystis eucalypticola
Ceratocystis fimbriata
Ceratocystis manginecans
Ceratocystis platani
Cercospora fijiensis
Chaetomium globosum
Chaetomium thermophilum
Chlamydia psittaci
Chlamydia trachomatis
Chlamydophila pneumoniae
Chromobacterium violaceum
Chryseobacterium gleum
Chryseobacterium indologenes
Chrysosporium queenslandicum
Citrobacter amalonaticus
Citrobacter freundii
Citrobacter koseri
Cladophialophora bantiana
Cladophialophora carrionii
Cladophialophora immunda
Cladophialophora psammophila
Cladophialophora yegresii
Clonorchis sinensis
Clostridium baratii
Clostridium bifermentans
Clostridium clostridioforme
Clostridium difficile
Clostridium innocuum
Clostridium novyi
Clostridium perfringens
Clostridium sordellii
Clostridium tetani
Coccidioides immitis
Coccidioides posadasii
Cokeromyces recurvatus
Colletotrichum acutatum
Colletotrichum falcatum
Colletotrichum fioriniae
Colletotrichum gloeosporioides
Colletotrichum godetiae
Colletotrichum graminicola
Colletotrichum higginsianum
Colletotrichum incanum
Colletotrichum nymphaeae
Colletotrichum orbiculare
Colletotrichum salicis
Colletotrichum simmondsii
Colletotrichum sublineola
Colletotrichum tofieldiae
Comamonas testosteroni
Conidiobolus coronatus
Conidiobolus incongruus
Coniosporium apollinis
Corynebacterium ablatum
Corynebacterium accolens
Corynebacterium afermentans
Corynebacterium argentoratense
Corynebacterium aurimucosum
Corynebacterium diphtheriae
Corynebacterium falsenii
Corynebacterium freiburgense
Corynebacterium freneyi
Corynebacterium glucuronolyticum
Corynebacterium jeikeium
Corynebacterium kroppenstedtii
Corynebacterium kutscheri
Corynebacterium lipophiloflavum
Corynebacterium lymphophilum
Corynebacterium massiliense
Corynebacterium matruchotii
Corynebacterium minutissimum
Corynebacterium propinquum
Corynebacterium pseudodiphtheriticum
Corynebacterium pseudotuberculosis
Corynebacterium renale
Corynebacterium riegelii
Corynebacterium simulans
Corynebacterium stationis
Corynebacterium striatum
Corynebacterium timonense
Corynebacterium tuscaniense
Corynebacterium ulcerans
Corynebacterium urealyticum
Corynebacterium xerosis
Corynespora cassiicola
Cowpox virus
Coxiella burnetii
Cryptococcus bacillisporus
Cryptococcus bestiolae
Cryptococcus dejecticola
Cryptococcus deuterogattii
Cryptococcus fagi
Cryptococcus gattii
Cryptococcus neoformans
Cryptococcus pinus
Cryptococcus skinneri
Cryptococcus tetragattii
Cryptosporidium hominis
Cryptosporidium muris
Cryptosporidium parvum
Cunninghamella bertholletiae
Cupriavidus gilardii
Cupriavidus metallidurans
Curvularia lunata
Cyclospora cayetanensis
Cyphellophora europaea
Cytomegalovirus (CMV)
Debaryomyces fabryi
Delftia acidovorans
Dermabacter hominis
Dermacoccus nishinomiyaensis
Diaporthe ampelina
Diaporthe aspalathi
Diaporthe longicolla
Dirofilaria immitis
Dracunculus medinensis
Dysgonomonas capnocytophagoides
Dysgonomonas gadei
Dysgonomonas hofstadii
Dysgonomonas mossii
Echinococcus granulosus
Echinococcus multilocularis
Echinostoma caproni
Edwardsiella hoshinae
Edwardsiella tarda
Eggerthella lenta
Ehrlichia canis
Ehrlichia chaffeensis
Ehrlichia muris
Eikenella corrodens
Elizabethkingia anophelis
Elizabethkingia meningoseptica
Elizabethkingia miricola
Emmonsia crescens
Emmonsia parva
Empedobacter brevis
Encephalitozoon cuniculi
Encephalitozoon hellem
Encephalitozoon intestinalis
Encephalitozoon romaleae
Entamoeba histolytica
Enterobacter aerogenes
Enterobacter amnigenus
Enterobacter cloacae complex
Enterobacter sakazakii
Enterobius vermicularis
Enterococcus asini
Enterococcus avium
Enterococcus casseliflavus
Enterococcus cecorum
Enterococcus columbae
Enterococcus dispar
Enterococcus durans
Enterococcus faecalis
Enterococcus faecium
Enterococcus gallinarum
Enterococcus gilvus
Enterococcus haemoperoxidus
Enterococcus hirae
Enterococcus italicus
Enterococcus malodoratus
Enterococcus mundtii
Enterococcus pallens
Enterococcus phoeniculicola
Enterococcus pseudoavium
Enterococcus raffinosus
Enterococcus saccharolyticus
Enterococcus sulfureus
Enterococcus thailandicus
Enterocytozoon bieneusi
Epstein-Barr virus (EBV)
Erysipelothrix rhusiopathiae
Escherichia albertii
Escherichia blattae
Escherichia coli
Escherichia fergusonii
Escherichia hermannii
Escherichia vulneris
Eubacterium limosum
Eubacterium nodatum
Exophiala alcalophila
Exophiala aquamarina
Exophiala calicioides
Exophiala dermatitidis
Exophiala mesophila
Exophiala oligosperma
Exophiala sideris
Exophiala spinifera
Exophiala xenobiotica
Facklamia hominis
Facklamia sourekii
Fasciola hepatica
Filifactor alocis
Filobasidium wieringae
Finegoldia magna
Fonsecaea erecta
Fonsecaea monophora
Fonsecaea multimorphosa
Fonsecaea nubica
Fonsecaea pedrosoi
Francisella hispaniensis
Francisella noatunensis
Francisella philomiragia
Francisella tularensis
Fusarium avenaceum
Fusarium circinatum
Fusarium fujikuroi
Fusarium graminearum
Fusarium langsethiae
Fusarium nygamai
Fusarium oxysporum
Fusarium poae
Fusarium pseudograminearum
Fusarium sambucinum
Fusarium temperatum
Fusarium verticillioides
Fusarium virguliforme
Fusobacterium mortiferum
Fusobacterium necrophorum
Fusobacterium nucleatum
Fusobacterium varium
Gammapapillomavirus 1
Gammapapillomavirus 10
Gammapapillomavirus 11
Gammapapillomavirus 13
Gammapapillomavirus 14
Gammapapillomavirus 15
Gammapapillomavirus 16
Gammapapillomavirus 17
Gammapapillomavirus 19
Gammapapillomavirus 2
Gammapapillomavirus 3
Gammapapillomavirus 4
Gammapapillomavirus 5
Gammapapillomavirus 6
Gammapapillomavirus 7
Gammapapillomavirus 8
Gammapapillomavirus 9
Gardnerella vaginalis
Gemella bergeri
Gemella haemolysans
Gemella morbillorum
Gemella sanguinis
Geotrichum candidum
Giardia lamblia
Gordonia bronchialis
Gordonia rubripertincta
Gordonia terrae
Gordonibacter pamelaeae
Granulicatella adiacens
Granulicatella elegans
Grimontia hollisae
Haemophilus aegyptius
Haemophilus ducreyi
Haemophilus haemolyticus
Haemophilus influenzae
Haemophilus parahaemolyticus
Haemophilus parainfluenzae
Hafnia alvei
Hanseniaspora uvarum
Hansenula fabianii
Helicobacter cinaedi
Helicobacter fennelliae
Helicobacter pylori
Herpes B virus
Herpes simplex virus type 1 (HSV-1)
Herpes simplex virus type 2 (HSV-2)
Histoplasma capsulatum
Human adenovirus A
Human adenovirus B
Human adenovirus C
Human adenovirus D
Human adenovirus E
Human adenovirus F
Human bocavirus
Human herpesvirus 6A
Human herpesvirus 6B
Human herpesvirus 7
Human papillomavirus
Human papillomavirus 132-like viruses
Human papillomavirus type 136
Human papillomavirus type 140
Human papillomavirus type 154
Human papillomavirus type 167
Human parvovirus
Human polyomavirus 6
Human polyomavirus 7
Hymenolepis nana
JC polyomavirus
Kaposi sarcoma-associated herpesvirus
KI polyomavirus
Kingella denitrificans
Kingella kingae
Kingella oralis
Klebsiella oxytoca
Klebsiella pneumoniae
Kluyvera ascorbata
Kluyvera cryocrescens
Kluyvera intermedia
Kluyveromyces lactis
Kocuria kristinae
Kytococcus sedentarius
Lachancea kluyveri
Lachancea lanzarotensis
Lachancea thermotolerans
Lachancea waltii
Lactobacillus acidophilus
Lactobacillus casei
Lactobacillus crispatus
Lactobacillus fermentum
Lactobacillus gasseri
Lactobacillus iners
Lactobacillus jensenii
Lactobacillus plantarum
Lactobacillus rhamnosus
Lactobacillus sakei
Lactobacillus ultunensis
Lactococcus garvieae
Leclercia adecarboxylata
Legionella anisa
Legionella bozemanae
Legionella cherrii
Legionella drancourtii
Legionella dumoffii
Legionella fairfieldensis
Legionella fallonii
Legionella geestiana
Legionella hackeliae
Legionella jamestowniensis
Legionella lansingensis
Legionella longbeachae
Legionella massiliensis
Legionella micdadei
Legionella moravica
Legionella norrlandica
Legionella oakridgensis
Legionella pneumophila
Legionella shakespearei
Legionella wadsworthii
Leifsonia aquatica
Leishmania aethiopica
Leishmania amazonensis
Leishmania braziliensis
Leishmania donovani
Leishmania major
Leishmania mexicana
Leishmania panamensis
Leishmania peruviana
Leishmania tropica
Leminorella grimontii
Leptosphaeria maculans
Leptospira alexanderi
Leptospira alstonii
Leptospira biflexa
Leptospira borgpetersenii
Leptospira broomii
Leptospira fainei
Leptospira inadai
Leptospira interrogans
Leptospira kirschneri
Leptospira kmetyi
Leptospira licerasiae
Leptospira mayottensis
Leptospira meyeri
Leptospira noguchii
Leptospira santarosai
Leptospira terpstrae
Leptospira vanthielii
Leptospira weilii
Leptospira wolbachii
Leptospira wolffii
Leptospira yanagawae
Leptotrichia buccalis
Leuconostoc citreum
Leuconostoc lactis
Leuconostoc mesenteroides
Leuconostoc pseudomesenteroides
Lichtheimia corymbifera
Lichtheimia ramosa
Listeria grayi
Listeria innocua
Listeria ivanovii
Listeria monocytogenes
Listeria seeligeri
Listeria welshimeri
Loa loa
Lodderomyces elongisporus
Macrophomina phaseolina
Madurella mycetomatis
Malassezia caprae
Malassezia cuniculi
Malassezia dermatis
Malassezia equina
Malassezia furfur
Malassezia globosa
Malassezia nana
Malassezia obtusa
Malassezia pachydermatis
Malassezia slooffiae
Malassezia sympodialis
Malassezia yamatoensis
Mannheimia haemolytica
Megasphaera micronuciformis
Memnoniella echinata
Merkel cell polyomavirus
Metarhizium acridum
Metarhizium album
Metarhizium anisopliae
Metarhizium brunneum
Metarhizium guizhouense
Metarhizium majus
Metarhizium rileyi
Metarhizium robertsii
Methanobrevibacter smithii
Metschnikowia bicuspidata
Metschnikowia fructicola
Microbacterium foliorum
Microbacterium oxydans
Microbacterium paraoxydans
Microbacterium testaceum
Micrococcus luteus
Micrococcus lylae
Microsporum canis
Microsporum gypseum
Mobiluncus curtisii
Mobiluncus mulieris
Moellerella wisconsensis
Mogibacterium timidum
Molluscum contagiosum virus
Monkeypox virus
Moraxella atlantae
Moraxella catarrhalis
Moraxella lacunata
Moraxella nonliquefaciens
Moraxella phenylpyruvica
Morganella morganii
Mortierella alpina
Mortierella elongata
Mortierella verticillata
Mucor ambiguus
Mucor circinelloides
Mucor indicus
Mucor irregularis
Mucor velutinosus
Mupapillomavirus 1
Mupapillomavirus 2
Myceliophthora thermophila
Mycobacterium abscessus
Mycobacterium arupense
Mycobacterium asiaticum
Mycobacterium avium complex (MAC)
Mycobacterium brisbanense
Mycobacterium canariasense
Mycobacterium chelonae
Mycobacterium chimaera
Mycobacterium cosmeticum
Mycobacterium fortuitum
Mycobacterium genavense
Mycobacterium goodii
Mycobacterium gordonae
Mycobacterium haemophilum
Mycobacterium heckeshornense
Mycobacterium heraklionense
Mycobacterium immunogenum
Mycobacterium iranicum
Mycobacterium kansasii
Mycobacterium kumamotonense
Mycobacterium kyorinense
Mycobacterium leprae
Mycobacterium mageritense
Mycobacterium malmoense
Mycobacterium marinum
Mycobacterium nebraskense
Mycobacterium neoaurum
Mycobacterium novocastrense
Mycobacterium parascrofulaceum
Mycobacterium peregrinum
Mycobacterium phlei
Mycobacterium scrofulaceum
Mycobacterium senegalense
Mycobacterium septicum
Mycobacterium setense
Mycobacterium simiae
Mycobacterium smegmatis
Mycobacterium szulgai
Mycobacterium thermoresistibile
Mycobacterium triplex
Mycobacterium tuberculosis complex
Mycobacterium tusciae
Mycobacterium vaccae
Mycobacterium wolinskyi
Mycobacterium xenopi
Mycoplasma fermentans
Mycoplasma genitalium
Mycoplasma hominis
Mycoplasma hyopneumoniae
Mycoplasma penetrans
Mycoplasma pneumoniae
Mycoplasma pulmonis
Myroides odoratimimus
Myroides odoratus
Naegleria fowleri
Nakaseomyces bacillisporus
Nakaseomyces delphensis
Nakazawaea peltata
Necator americanus
Nectria haematococca
Neisseria elongata
Neisseria flavescens
Neisseria gonorrhoeae
Neisseria lactamica
Neisseria meningitidis
Neisseria mucosa
Neisseria polysaccharea
Neisseria sicca
Neisseria weaveri
Neofusicoccum parvum
Neorickettsia helminthoeca
Neorickettsia sennetsu
Nocardia abscessus
Nocardia acidovorans
Nocardia africana
Nocardia alba
Nocardia amamiensis
Nocardia anaemiae
Nocardia aobensis
Nocardia araoensis
Nocardia arthritidis
Nocardia asiatica
Nocardia beijingensis
Nocardia brasiliensis
Nocardia brevicatena
Nocardia caishijiensis
Nocardia carnea
Nocardia cerradoensis
Nocardia concava
Nocardia coubleae
Nocardia crassostreae
Nocardia cummidelens
Nocardia cyriacigeorgica
Nocardia dassonvillei
Nocardia elegans
Nocardia exalbida
Nocardia farcinica
Nocardia flavorosea
Nocardia fusca
Nocardia gamkensis
Nocardia grenadensis
Nocardia harenae
Nocardia higoensis
Nocardia ignorata
Nocardia inohanensis
Nocardia jejuensis
Nocardia jiangxiensis
Nocardia kruczakiae
Nocardia lijiangensis
Nocardia mexicana
Nocardia mikamii
Nocardia miyunensis
Nocardia niigatensis
Nocardia niwae
Nocardia nova
Nocardia otitidiscaviarum
Nocardia paucivorans
Nocardia pneumoniae
Nocardia pseudobrasiliensis
Nocardia pseudovaccinii
Nocardia puris
Nocardia rhamnosiphila
Nocardia salmonicida
Nocardia seriolae
Nocardia shimofusensis
Nocardia sienata
Nocardia soli
Nocardia speluncae
Nocardia takedensis
Nocardia tenerifensis
Nocardia terpenica
Nocardia testacea
Nocardia thailandica
Nocardia transvalensis
Nocardia uniformis
Nocardia vaccinii
Nocardia vermiculata
Nocardia veterana
Nocardia vinacea
Nocardia violaceofusca
Nocardia xishanensis
Nocardia yamanashiensis
Nosema apis
Nosema bombycis
Nosema ceranae
Nupapillomavirus 1
Ochrobactrum anthropi
Ochrobactrum intermedium
Ochroconis constricta
Ochroconis gallopava
Odoribacter splanchnicus
Oerskovia turbata
Ogataea methanolica
Ogataea parapolymorpha
Ogataea polymorpha
Oligella ureolytica
Oligella urethralis
Olsenella uli
Onchocerca volvulus
Ophiostoma novo-ulmi
Ophiostoma piceae
Opisthorchis viverrini
Orf virus
Oribacterium sinus
Orientia tsutsugamushi
Paecilomyces hepiali
Paenibacillus alvei
Pantoea agglomerans
Paraburkholderia fungorum
Paracoccidioides brasiliensis
Paracoccidioides lutzii
Parvimonas micra
Pasteurella bettyae
Pasteurella multocida
Pasteurella pneumotropica
Pediococcus acidilactici
Pediococcus pentosaceus
Penicillium brasilianum
Penicillium camemberti
Penicillium capsulatum
Penicillium carneum
Penicillium digitatum
Penicillium expansum
Penicillium freii
Penicillium griseofulvum
Penicillium islandicum
Penicillium italicum
Penicillium marneffei
Penicillium nalgiovense
Penicillium nordicum
Penicillium oxalicum
Penicillium paneum
Penicillium paxilli
Penicillium piceum
Penicillium pinophilum
Penicillium purpurogenum
Penicillium roqueforti
Penicillium rubens
Penicillium verruculosum
Peptoniphilus coxii
Peptoniphilus duerdenii
Peptoniphilus harei
Peptoniphilus indolicus
Peptoniphilus lacrimalis
Peptoniphilus rhinitidis
Peptostreptococcus anaerobius
Peptostreptococcus stomatis
Phaeoacremonium minimum
Phanerochaete carnosa
Phanerochaete chrysosporium
Phellinus noxius
Phialophora attae
Phoma herbarum
Photobacterium damselae
Photorhabdus asymbiotica
Photorhabdus luminescens
Phycomyces blakesleeanus
Pichia anomala
Plasmodium cynomolgi
Plasmodium falciparum
Plasmodium knowlesi
Plasmodium ovale
Plasmodium vivax
Plesiomonas shigelloides
Pluralibacter gergoviae
Pneumocystis carinii
Pneumocystis jirovecii
Pneumocystis murina
Porcine circovirus 1
Porcine circovirus 2
Porphyromonas asaccharolytica
Porphyromonas gingivalis
Prevotella bivia
Prevotella buccae
Prevotella buccalis
Prevotella corporis
Prevotella denticola
Prevotella disiens
Prevotella intermedia
Prevotella loescheii
Prevotella melaninogenica
Prevotella oralis
Primate bocaparvovirus 1
Propionibacterium acidifaciens
Propionibacterium granulosum
Propionibacterium propionicum
Proteus mirabilis
Proteus vulgaris
Providencia alcalifaciens
Providencia rettgeri
Providencia stuartii
Pseudocowpox virus
Pseudomonas aeruginosa
Pseudomonas alcaligenes
Pseudomonas fluorescens
Pseudomonas fulva
Pseudomonas luteola
Pseudomonas mendocina
Pseudomonas mosselii
Pseudomonas oryzihabitans
Pseudomonas pseudoalcaligenes
Pseudomonas putida
Pseudoramibacter alactolyticus
Pseudozyma hubeiensis
Purpureocillium lilacinum
Pyrenochaeta lycopersici
Pyrenochaeta mackinnonii
Rahnella aquatilis
Ralstonia insidiosa
Ralstonia mannitolilytica
Ralstonia pickettii
Ramichloridium mackenziei
Rasamsonia emersonii
Rhizoctonia solani
Rhizomucor miehei
Rhizomucor variabilis
Rhizopus delemar
Rhizopus microsporus
Rhizopus oryzae
Rhizopus stolonifer
Rhodococcus equi
Rhodococcus erythropolis
Rhodococcus fascians
Rhodococcus rhodochrous
Rhodotorula graminis
Rhodotorula mucilaginosa
Rhodotorula toruloides
Rhytidhysteron rufulum
Rickettsia akari
Rickettsia amblyommii
Rickettsia australis
Rickettsia canadensis
Rickettsia conorii
Rickettsia felis
Rickettsia helvetica
Rickettsia honei
Rickettsia japonica
Rickettsia massiliae
Rickettsia monacensis
Rickettsia parkeri
Rickettsia prowazekii
Rickettsia raoultii
Rickettsia rickettsii
Rickettsia sibirica
Rickettsia slovaca
Rickettsia typhi
Riemerella anatipestifer
Roseomonas cervicalis
Roseomonas fauriae
Roseomonas gilardii
Roseomonas mucosa
Rothia aeria
Rothia dentocariosa
Rothia mucilaginosa
Saccharomyces cerevisiae
Saksenaea oblongispora
Saksenaea vasiformis
Salmonella bongori
Salmonella enterica
Scedosporium apiospermum
Scedosporium aurantiacum
Schistosoma haematobium
Schistosoma japonicum
Schistosoma mansoni
Schizophyllum commune
Serratia ficaria
Serratia fonticola
Serratia liquefaciens
Serratia marcescens
Serratia plymuthica
Serratia rubidaea
Shewanella algae
Shewanella putrefaciens
Shigella boydii
Shigella dysenteriae
Shigella flexneri
Shigella sonnei
Slackia exigua
Solobacterium moorei
Sphingobacterium spiritivorum
Sporopachydermia quercuum
Sporothrix brasiliensis
Sporothrix globosa
Sporothrix insectorum
Sporothrix pallida
Sporothrix schenckii
Stachybotrys chartarum
Stachybotrys chlorohalonata
Staphylococcus agnetis
Staphylococcus arlettae
Staphylococcus aureus
Staphylococcus auricularis
Staphylococcus capitis
Staphylococcus caprae
Staphylococcus carnosus
Staphylococcus caseolyticus
Staphylococcus chromogenes
Staphylococcus cohnii
Staphylococcus condimenti
Staphylococcus epidermidis
Staphylococcus equorum
Staphylococcus gallinarum
Staphylococcus haemolyticus
Staphylococcus hominis
Staphylococcus hyicus
Staphylococcus lentus
Staphylococcus lugdunensis
Staphylococcus pasteuri
Staphylococcus pettenkoferi
Staphylococcus pseudintermedius
Staphylococcus saprophyticus
Staphylococcus schleiferi
Staphylococcus sciuri
Staphylococcus simiae
Staphylococcus simulans
Staphylococcus succinus
Staphylococcus vitulinus
Staphylococcus warneri
Staphylococcus xylosus
Stemphylium lycopersici
STL polyomavirus
Streptobacillus moniliformis
Streptococcus agalactiae
Streptococcus anginosus
Streptococcus canis
Streptococcus constellatus
Streptococcus cricetus
Streptococcus cristatus
Streptococcus dysgalactiae
Streptococcus equi
Streptococcus equinus
Streptococcus ferus
Streptococcus gallolyticus
Streptococcus gordonii
Streptococcus hyovaginalis
Streptococcus infantarius
Streptococcus infantis
Streptococcus iniae
Streptococcus intermedius
Streptococcus lutetiensis
Streptococcus macacae
Streptococcus massiliensis
Streptococcus mitis
Streptococcus mutans
Streptococcus oralis
Streptococcus parasanguinis
Streptococcus pasteurianus
Streptococcus peroris
Streptococcus pneumoniae
Streptococcus porcinus
Streptococcus pseudopneumoniae
Streptococcus pyogenes
Streptococcus ratti
Streptococcus salivarius
Streptococcus sanguinis
Streptococcus sobrinus
Streptococcus suis
Streptococcus thermophilus
Streptococcus uberis
Streptococcus vestibularis
Streptomyces somaliensis
Strongyloides stercoralis
Sutterella wadsworthensis
Syncephalastrum monosporum
Syncephalastrum racemosum
Taenia asiatica
Talaromyces cellulolyticus
Talaromyces leycettanus
Talaromyces stipitatus
Tanapox virus
Tatumella ptyseos
Thermoascus crustaceus
Thermomyces lanuginosus
Thielavia terrestris
Torque teno virus
Torque teno virus 1
Torque teno virus 10
Torque teno virus 12
Torque teno virus 14
Torque teno virus 15
Torque teno virus 16
Torque teno virus 19
Torque teno virus 2
Torque teno virus 25
Torque teno virus 26
Torque teno virus 27
Torque teno virus 28
Torque teno virus 3
Torque teno virus 4
Torque teno virus 6
Torque teno virus 7
Torque teno virus 8
Torulaspora delbrueckii
Toxocara canis
Toxoplasma gondii
Trachipleistophora hominis
Treponema pallidum
Trichinella nelsoni
Trichinella pseudospiralis
Trichinella spiralis
Trichoderma asperellum
Trichoderma atroviride
Trichoderma gamsii
Trichoderma hamatum
Trichoderma harzianum
Trichoderma longibrachiatum
Trichoderma parareesei
Trichoderma reesei
Trichoderma virens
Trichodysplasia spinulosa-associated polyomavirus
Trichomonas vaginalis
Trichophyton benhamiae
Trichophyton interdigitale
Trichophyton rubrum
Trichophyton verrucosum
Trichosporon asahii
Trichosporon cutaneum
Trichosporon guehoae
Trichosporon oleaginosus
Trichosporon porosum
Trichuris trichiura
Tropheryma whipplei
Trypanosoma brucei
Trypanosoma cruzi
Tsukamurella paurometabola
Turicella otitidis
Ureaplasma parvum
Ureaplasma urealyticum
Ustilago cynodontis
Ustilago esculenta
Ustilago hordei
Ustilago maydis
Ustilago trichophora
Vaccinia virus
Valsa mali
Varicella-zoster virus (VZV)
Variola virus
Veillonella dispar
Veillonella montpellierensis
Veillonella parvula
Verticillium alfalfae
Verticillium dahliae
Verticillium longisporum
Verticillium tricorpus
Vibrio alginolyticus
Vibrio cholerae
Vibrio fluvialis
Vibrio furnissii
Vibrio harveyi
Vibrio metschnikovii
Vibrio mimicus
Vibrio parahaemolyticus
Vibrio vulnificus
Vittaforma corneae
Volvariella volvacea
Wallemia ichthyophaga
Wallemia mellicola
Weeksella virosa
Weissella confusa
Weissella paramesenteroides
Wickerhamomyces ciferrii
Wolbachia pipientis
WU Polyomavirus
Wuchereria bancrofti
Xanthomonas axonopodis
Yaba monkey tumor virus
Yarrowia deformans
Yarrowia keelungensis
Yarrowia lipolytica
Yersinia enterocolitica
Yersinia frederiksenii
Yersinia intermedia
Yersinia kristensenii
Yersinia pestis
Yersinia pseudotuberculosis
Yersinia ruckeri
Yokenella regensburgei

Karius may periodically modify this Pathogen List in line with updates of the company sequence database and analytical methods. Health care providers should interpret all KariusTM Test results in view of the version of the Pathogen List posted on this website as of the date of the clinical report.